Yes, patch them with a mix that is heavy on the sand. It could be that your
cob mix was not sandy
enough to begin with, or a combination of not enough sand and not enough fiber.
1cm from the get go is a big crack IMO. If the original mix was not optimal, you may find that the over continues to crack as it heats and cools. Patching it will help, but it may never be as durable as an oven made with a proper mix. Again, assuming it is an issue with the initial mix.