Wow - that is quite a post! I think that in a nutshell you are asking why aquaponics vs soil and/or straight aquaculture, is the low water use real, is there a danger of pathogens, and what the need for backup power? Assuming I've got them all I'll attempt to address them one by one.
1) Why aquaponics vs soil and/or straight aquaculture? I'll start by saying that I love
gardening in soil outdoors in the summer. I'm drinking my morning
coffee looking out over my veggie garden as I write this. But aquaponic gardens have some distinct advantages, especially when done year-round indoors or in a greenhouse. First, there are no weeds. Second, aquaponic (and hydroponic) gardens can be significantly more productive than soil because the plants are being fed all the water, nutrients, and oxygen all the time. Third, the lack of dirt makes them cleaner for indoor growing, and helps to lower the harmful insect population. If you are in a greenhouse the mass of all that water helps to moderate temperature fluctuation. And, let's face it, the fish add a really fun, lively element to
gardening.
As to why not just grow fish and use the waste water in your soil garden, I'll start by saying that myself, and my company, focus exclusively on home and school gardeners, not commercial farming. Most home food growers are unwilling to take on the expense and maintenance hassle of setting up a fully filtered aquaculture operation in order to grow game fish. What aquaponics does is provide that filtration for the fish system in a way that dramatically lowers the setup and maintenance cost and complication because it does it in a more natural way, mimicking a recirculating wetland environment.
2) Aquaponics uses far less water than traditional agriculture because the water is captured and recirculated, and is never drained off as it is in recirculating aquaculture and hydroponic operations. In our grow lab we find that our systems use about 1% of their water a day, so we need to top up the tanks about every two weeks or so. I'll compare those to my soil gardens where I'm running soaker hoses every day in the summer for 45 minutes. Granted, it is hotter and
dryer outdoors, but the fact that the water is running off clearly plays a very significant role.
3) As for E Coli, and other dangerous pathogens, because fish are cold blooded creatures they cannot harbor those diseases themselves. The only way that could happen is if Salmonella were possibly introduced externally (a turtle getting into the system, or a bird flying overhead and dropping waste into the water). That said, I have never heard of someone getting any sort of food borne illness from an aquaponic system.
4) As you accurately pointed out, Aquaponic systems require power to circulate the water and provide oxygen to the fish. But the amount of buffer you have in a power outage depends on a couple of things. First, the type of fish you grow. If you are growing fish that come from a pond, or more still water environment like tilapia they will have far less need for high oxygen levels than, say, a trout that is used to being in a highly oxygenated environment. You might have hours to react, vs minutes. Second, the cooler your water is the more it will be able to retain the oxygen after the power goes out. That said, every aquaponic system
should have some sort of backup plan for a power outage. We actually
sell an inverter system called AquaBackup that runs off a marine battery that powers a DC aerator that ran for over three days when we first tested it.
I'll conclude by saying that I would never say that aquaponics is the end-all, be-all of gardening, nor would I recommend that anyone rip out their soil gardens and replace them with aquaponics. I do strongly believe that aquaponics is a wonderful addition to any garden, especially if you want to grow edible fish and/or you want to grow indoors, year-round.
Thank you for your excellent questions!