Absolutely fascinating to see that you've gone through the entire process of aqueous extraction with this plant!! But--despite widespread misinformation repeated ad nauseum on the internet & some dye
books, Baptisia species are not indigoferous plants and do not contain indigo precursors (hence your results). Much of this is due to persistent confusion with the
native wild indigo, Indigofera caroliniana. But this wonderfully detailed account you've given here is really useful to demonstrate what happens when you carry out an aqueous extraction with Baptisia (blackish pigment, no indoxyl, no indigo).
I do hope you'll try growing a true indigo plant next year - Persicaria (formerly Polygonum) tinctoria, aka Japanese indigo, is super easy to grow & to use --fresh leaf methods are fun and instant gratification, no dye vat necessary. (And you're already familiar with the extraction process!) I grow a variety of indigo-bearing plants myself -- Persicaria, Indigofera, Isatis and a handful of weirdos -- and
sell seeds every spring, so get in touch if you're interested. I also admin for an international indigo extraction group on FB: we'd love to have you post your adventure there for the edification of all