Don't know about fungi that might detoxify juglone, but there are bacteria that have been found to be up to the task. I'm thinking that much of the microbial biocontrol for crop protection literature and efforts have focused on bacteria, one reason being the ease with which they can be produced in batch culture as well as formulated for a seed/root application. So one approach, if trying to establish seeds/seedlings of other species near the rhizosphere of black walnut would be to find a rhizosphere-competent bacterium for that plant species that also is known to be able to detoxify juglone. Can't imagine a commercial product having those qualities, but tunneling through some research contacts may yield something to try, especially as it would be unlikely to require regulatory oversight.
Fluorescent Pseudomonad ID'd for degrading juglone:
http://amo.colorado.edu/schmidt1988.pdf
(Fluorescent Pseudomonads have a deep history in research on the biocontrol of plant pathogens.)
For a good review on juglone, see:
http://jem.forrex.org/index.php/jem/article/viewFile/119/473
(Let me know if links are dead or protected.) It's probable, given the chemical nature of juglone, that walnut tree variants that do not produce juglone might be found, but given the high toxicity of juglone to insects, I suspect it would be deficient in one of its main defenses against insect predation.