NASA did a lot of work on this very idea and they started it back in the 1970's. At the end of the 1980's they determined that it was not working and they stopped the research.
Their problem was that they were trying to create too many environments and in a space station with very little room, that becomes a logistic nightmare.
It is far more efficient to set a single environment and select plants that fit well into that environment than it is to try for best fit environment to each plant you want to grow.
What works is to make each plant a best fit to the environment, it allows for maximum growing space in any size area.
When we breed plants for a specific location, we are tuning the plant to that environment, this is what
Joseph Lofthouse does, it is the process of creating
landrace species.
Seed companies do two types of breeding, they do closed pollination (gather the pollen and apply by brush then cover the female flower to prevent external pollination) or they do open pollination where there is a large distance between subspecies so cross pollination doesn't take place.
Closed pollination is usually done when they are trying to improve a species (this is how we have so many different tomatoes and corn now) then for producing the seeds you buy they do open pollination as above.
The same protocols can be used by any gardener.
Redhawk