We have one bed that has been double dug and the "rocks" were removed as we found them, stones (1" diameter and smaller) remain in this bed.
This is the one bed we use for root vegetables such as carrots and beets, which needed the extra work done so they would grow.
Our other beds (so far total is 7 garden beds) have never been dug, we simply plant,
water and mulch. If we find a rock when planting, it is removed but otherwise nothing is done to remove anything but the harvest.
Rocks are only going to give up minerals if bacteria and fungi are present since these are the organisms that can "mine" the minerals from rocks.
If you dig your beds every year, you are disrupting on a yearly basis, disruption tends to kill off bacteria and fungi. Tillage is the surest method to create dirt out of soil.
If you want your plants to be able to access those minerals that are held in the rocks, you need to encourage bacterial growth and fungal growth.
Stones are part of soil structure, they keep soil from compacting, provide air passages to
roots, they also provide homes to bacteria and serve as anchor points for fungi and plant roots.
water infiltrates better in soils that contain some stones, those air passages also function as water infiltration highways.
The only time you don't want them is when you are growing delicate root vegetables but even then, small stones are not going to do any harm and will instead do far more good in the presence of a healthy microbiome.
One of the things we do is start a
garden bed space as a
straw bale garden, the bales are set in place, surrounded with 2x6 or 2x10 to keep the bales tight together and then those bales are inoculated with spent
coffee grounds and watered for three weeks.
After that break in period they are planted with started plants.
We can get two years from a set of bales, at which point we can add a second layer of new bales and go through the process again.
At that point, the bed has become a proper raised bed with no stones in the medium since it is all composted straw and soil.
From that point it is just a matter of adding finished
compost and compost teas, the soil beneath the bed has loosened and is very rich in microbes and worms.
Redhawk